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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs3121419 chr4:3232257 C/T 4.04E-5 481 16.87 14.03 14.3 KM Plot
THCA rs312477 chr3:53515136 G/A 3.92E-5 480 16.37 15.3 15.12 KM Plot
THCA rs3129308 chr4:3309272 C/T 4.72E-5 490 12.23 15.7 16.95 KM Plot
THCA rs3129310 chr4:3301388 T/G 0.000251 482 12.23 15.7 16.83 KM Plot
THCA rs3129314 chr4:3293039 G/T 0.000127 478 12.07 15.83 17.03 KM Plot
THCA rs3129316 chr4:3287906 A/G 8.9E-5 469 11.5 16.18 17.05 KM Plot
THCA rs3129318 chr4:3276071 A/G 6.16E-5 482 12.37 14.85 17.42 KM Plot
THCA rs3129334 chr4:3368526 T/C 1.47E-5 479 12.07 15.23 16.87 KM Plot
THCA rs3133462 chr8:95848399 T/C 5.99E-6 472 7.67 16.5 16.07 KM Plot
THCA rs3135064 chr4:3285389 T/C 0.000192 469 11.78 14.93 18.13 KM Plot
THCA rs3135145 chr4:3299504 T/C 0.000216 483 12.57 15.23 16.83 KM Plot
THCA rs3135146 chr4:3307638 C/G 0.000184 490 16.83 15.83 12.37 KM Plot
THCA rs3136117 chr16:14025590 C/G 2.02E-10 484 15.2 18.3 11.5 KM Plot
THCA rs3136122 chr16:14026361 G/A 1.68E-10 487 15.2 19.9 11.5 KM Plot
THCA rs3136326 chr2:48024402 T/C 1.46E-7 480 15.23 17.53 8.27 KM Plot